CDS

Accession Number TCMCG011C09553
gbkey CDS
Protein Id XP_021893784.1
Location complement(join(856447..856872,859140..859214,859476..859550,859711..859776,859931..860016,860019..860109,860674..860743,860859..861010))
Gene LOC110811558
GeneID 110811558
Organism Carica papaya

Protein

Length 347aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA264084
db_source XM_022038092.1
Definition LOW QUALITY PROTEIN: splicing factor 3A subunit 2 [Carica papaya]

EGGNOG-MAPPER Annotation

COG_category A
Description splicing factor 3A subunit
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12826        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000245        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010720        [VIEW IN EMBL-EBI]
GO:0010975        [VIEW IN EMBL-EBI]
GO:0010976        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0022008        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031344        [VIEW IN EMBL-EBI]
GO:0031346        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045664        [VIEW IN EMBL-EBI]
GO:0045666        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048699        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050767        [VIEW IN EMBL-EBI]
GO:0050769        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051960        [VIEW IN EMBL-EBI]
GO:0051962        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071004        [VIEW IN EMBL-EBI]
GO:0071010        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120035        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACAGAGATTGGGGTTCGAAGCCCGGCAGCGGAGGCGCAGCCTCGGCTCAGAATGAGGCCATTGACCGTCGGGAGCGGCTTCGGAGGCTGGCCCTTGAAACCATTGATCTCGCTAAAGATCCCTATTTCATGCGCAATCATCTTGGGAGTTACGAGTGTAAGCTGTGTTTGACACTGCATAATAACGAAGGACTACNNNNNNNNNNNNNNNNNNNGGGAACTAAGAATCTGCGCAAAATTGCTGGTATGCCCTCTAAAGTTGGTATGTCTATAATGTTATTTTGTGGCCTGAAACCAAATGAATTATATGTTTCTACAGTAAAAATTGGCAGGCCTGGGTACCGTGTAACAAAGCAGTATGATCCCGAGACAAAGCAGAGGTCACTTCTCTTCCAGATTGAATATCCTGAGATAGAAGACAATACTAGGCCAAGACACCGTGTTATGTCATCTTATGAGCAGAAAGTCCAACCGTATGACAAGAGATACCAGTATCTTCTGTTTGCAGCAGAACCGTATGAGATTATTGCTTTCAAGGTTCCAAGCACAGAGATAGATAAATCCACTCCCAAGTTCTTCTCACATTGGGATCCAGATTCCAAAATGTTCACGCTGCAGGTATATTTCAAGACAAAGCCACCAGAGATTGGCAAACCCCCATCTGCTCCTGCAGCAAATGGCACAGCAGCACCAGGTGTTCCTCCAAGACCTTTACCTCCACCTCCCCAAGCCCCACCACCACCTCTACCACAAGGACTTCCAGCAGGTGCTCCATCAATAAATCCTCCTCGAGCCCCACCACCTCCGGCACCTGCATCATTGCCACCTCCTCCGCCTCCAATGGCAAATGGCCCTAGGCCTATGCCTCCTGGTGGAACTCCACCTGCACCACCCCCACCTCCAAGTGGCAGTGGCACAATGTTGAACTTCACTCCTGGCTCTCAGGTGGGTAGACCTCCTTCAATCCCTCCTCCTCCTCAAGGTTTTCCAGGCCAGGGTCCACGACCTCCTCTTCCCCCGCCTAATATGGGGCAGTAG
Protein:  
MDRDWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGLXXXXXXXGTKNLRKIAGMPSKVGMSIMLFCGLKPNELYVXSTVKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDNTRPRHRVMSSYEQKVQPYDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQVYFKTKPPEIGKPPSAPAANGTAAPGVPPRPLPPPPQAPPPPLPQGLPAGAPSINPPRAPPPPAPASLPPPPPPMANGPRPMPPGGTPPAPPPPPSGSGTMLNFTPGSQVGRPPSIPPPPQGFPGQGPRPPLPPPNMGQ